o
    {i                     @   s   d dl Z d dlZd dlZd dlmZ d dlmZ d dlm	Z	 d dl
mZ d dlZd dlmZmZmZmZmZmZ eejjZdd Z			dd
dZdd ZdddZdS )    N)
coo_matrix)connected_components)combinations)rejection_sample	make_heapdeheap_sortsimple_heap_pushhas_been_visitedmark_visitedc              
      sJ  t jt j | j| jj| jj| jtj	ddi dtj
jd d d dtj
jdtj
jdtj
jd d d dtj
jd d d dtj
jd	tj
jd
tj
jdtj
jdtj
jd d d dtj
jd d d dtj
jd d d dtj
jd d d d df dtj
jdtj
jdtj
jdtj
jd fdd}|S )NTcurrent_query   ijheap_prioritiesheap_indices	candidatevertexdd_vertexvisitedindicesindptrdata	heap_sizedistance_scaledistance_bound
seed_scale)fastmathnogillocalsc                    s  t | jd |}d| }t| jd D ]}d|d d < ks# kr:t| | d  }|dkr9| | | }	nq| | }	|d | }
|d | }dd tdD }|jd }t|D ]$}t|| }| |	}t|
||| t	|||f t
|| q\||
d  }t|\}}||k rt| |d  D ]2}| }t||dkrt
|| | |	}||k rt|
||| t	|||f ||
d  }qt|dkrnt|\}}||k sq|S )Nr   g      ?           r   c                 S   s"   g | ]}t t jt d fqS ))npfloat32infint32).0r    r(   K/home/ubuntu/.local/lib/python3.10/site-packages/pynndescent/graph_utils.py
<listcomp>I   s   " zJcreate_component_search.<locals>.custom_search_closure.<locals>.<listcomp>)r   shaperanger#   sqrtsumr&   r   heapqheappushr
   heappopr	   len)query_pointscandidate_indiceskepsilonr   resultr   r   normr   r   r   seed_setn_initial_pointsr   r   r   r   r   r   alternative_cosinealternative_dotr   distr   r   r(   r)   custom_search_closure!   sR   

z6create_component_search.<locals>.custom_search_closure)
pynnd_distr=   r<   	_raw_data_search_graphr   r   _distance_funcnumbanjittypesr$   uint32r&   uint8int16)indexr?   r(   r;   r)   create_component_search   s^   	
?rK   
   r!   c                 C   s  dd t dD }| tt|| jd | |d< |tt||jd | |d< d}	|||	  }
|d|	   }ddg}tj}|d d |d d f}|d sT|d r||
||||\}}}t||\}}t |jd D ]&}t |jd D ]}|||f |k r|||f }||	 | |||f f}qvqm||	 }t|d d df }|d|	  jd |jd krt	|d|	  |k|d|	 < ||d|	 < ||d|	   }
d|	 }	|d sT|d sT|d |d |fS )Nc                 S   s   g | ]
}t jd t jdqS )r   dtype)r#   zerosint64)r'   r   r(   r(   r)   r*      s    z2find_component_connection_edge.<locals>.<listcomp>r    r   r   T)
r,   r   r#   rP   r+   copyr%   r   uniqueany)
component1
component2search_closureraw_datar   	rng_statesearch_sizer6   r   
query_sider3   r4   changed	best_dist	best_edgeindsdists_r   r   new_indicesr(   r(   r)   find_component_connection_edge{   sD   


rb   c                 C   s   t | jd | jd ftjd}t||dk< ttj| jd tjd| jd |_| 	 |_
|	 |_| }d|j|jdk< |  ||j}|S )Nr   rM   r!   r   r"   )r   r+   r#   r$   FLOAT32_EPSrepeataranger&   rowravelcolr   tocsrr   eliminate_zerosmaximumT)neighbor_indicesneighbor_distancesr7   r(   r(   r)   adjacency_matrix_representation   s   

ro   c           
         s   t t| \} |  } j   fddtj|ddfddtt|dD }|D ]\}}}	|	|||f< |	|||f< q3| S )Nc              	      sx   t  | kd }t  |kd }t||jjjd\}}}jd ur-|}j| }j| }|||fS )Nr   )rY   )r#   whererb   rA   _visitedrX   _distance_correction_vertex_order)c1c2rT   rU   r   r   r   )component_idsrJ   rV   rY   r(   r)   new_edge   s    




zconnect_graph.<locals>.new_edgethreads)n_jobspreferc                 3   s$    | ]\}}t  ||V  qd S )N)joblibdelayed)r'   rt   ru   )rw   r(   r)   	<genexpr>   s
    
z connect_graph.<locals>.<genexpr>r    )	rK   r   tolilrs   r{   Parallelr   r,   ri   )
graphrJ   rY   ry   n_componentsr7   	new_edgesr   r   r   r(   )rv   rJ   rw   rV   rY   r)   connect_graph   s   
r   )rL   r!   )rL   N)rD   numpyr#   r/   scipy.sparser   scipy.sparse.csgraphr   	itertoolsr   pynndescent.distances	distancesr@   r{   pynndescent.utilsr   r   r   r   r	   r
   finfor$   epsrc   rK   rb   ro   r   r(   r(   r(   r)   <module>   s      	j
-